PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do013649.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bHLH
Protein Properties Length: 224aa    MW: 24328.5 Da    PI: 7.1374
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do013649.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.000333766130
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPka 30
                r++ + erE+  Rd++N+ f eL  +l ++
  Do013649.1 37 RKVHKAEREKHKRDHLNDLFIELGNMLVES 66
                678889*******************99984 PP

Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MVPSERGSVA TAVSTPAADK LLHGPIAGKK CKKAAPRKVH KAEREKHKRD HLNDLFIELG  60
NMLVESLRKE HSNLQNESHY VAIERNELQD ENGMLRKEIS ELQDDLRMRT SSNPAGWGHG  120
TAGLSPPVPH PTSAVFSSQQ AMQPPTIAST VFPLHQALAP SAVIEQSYAT PPPLELRLFP  180
GAASVEVHEP SEGQDAPNHV ARPQASYESG MINVSIQLIA KLGQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004984211.11e-121PREDICTED: transcription factor bHLH47-like
TrEMBLK4ADQ91e-121K4ADQ9_SETIT; Uncharacterized protein
STRINGSi037016m1e-120(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24813884
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.34e-20bHLH family protein